— Entry 001 · 2026.09.15 —

Design your synthetic biology project, end to end

Chain codon optimization, primer design, pathway engineering, and enzyme mining into one reproducible workflow — from sequence to strain.

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01

Workflows

Each workflow chains the tools you need to complete a real research task, with results flowing from one step to the next and fully reproducible.

Vector Construction

From coding sequence to assembled plasmid.

Codon optimization→Primer design→Assembly

Balance a metabolic route toward your target product.

Pathway design→Flux analysis→Strain engineering

Find and validate a catalytic candidate from genome to docking.

Gene mining→Homology modeling→Molecular docking

Literature & Data

Retrieve, verify, and organize the evidence behind your design.

Literature search→Cross-check→Cite

02

Core tools

The essential instruments for a synthetic biology project — each a full page of its own.

01Metabolic Pathway Design

Design and balance a metabolic route from substrate to product.

Backed by a curated pathway library, the tool assembles a biosynthesis route for your target compound and checks every step for flux balance — flagging bottlenecks before you build.

Curated pathway library for common biosynthesis routes Flux-aware balance check flags bottlenecks Chassis-specific tuning recommendations Validated against golden-standard pathways

pathwayflux balancechassisbottleneck

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02CRISPR Design

Design sgRNA and homology arms for precise genome editing.

Score guide RNAs for on-target activity and screen them for off-targets against your strain's own genome. Homology arms and the complete editing cassette come out in one design.

sgRNA design with on-target scoring Off-target screening across 30 chassis genomes Homology-arm design for HDR Complete editing cassette output

sgRNAhomology armoff-target30 chassis

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Mine catalytic candidates from genome to confirmation.

A funnel from sequence to hit: CAZy-family screening, BLAST homology search, and signal-peptide prediction surface candidates; molecular docking then validates them.

CAZy family screening BLAST homology search Signal peptide prediction Molecular docking validation

CAZyBLASTsignal peptidedocking

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04Multi-gene Assembly

Assemble multiple transcription units into one vector.

Arrange your cassettes and verify every junction and reading frame end to end — so the vector you order is the vector you intended.

Transcription unit arrangement Junction verification Reading frame check Ready-to-order vector output

transcription unitjunctioncassettevector

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05Expression Cassette Designer

Design promoter–gene–terminator cassettes.

Build complete expression units from verified parts and export annotated GenBank ready for cloning.

Promoter–gene–terminator arrangement Verified parts library Annotated GenBank export Cloning-ready output

promoterterminatorGenBankcloning

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06Research Field Overview

Grasp a research field at a glance.

Literature, methods, and key advances distilled into a fast, readable overview — understand a new field in minutes, with cited and verifiable sources.

Field literature survey Methods and key advances distilled Readable overview in minutes Cited, verifiable sources

at a glanceliteraturemethodsdistilled

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03

Build a reproducible pipeline

Every run records its inputs, parameters, and outputs — so a result can be reproduced, exported, and cited.

From sequence to strain, in one chain

Start with a target coding sequence. Optimize codons for your host, design primers, assemble the vector, and trace every step back to its inputs. Each result carries a reproducibility ID you can paste into your methods section.

04

Documentation

Getting started

Set up your first workflow and understand reproducibility.

Tool reference

Parameters, defaults, and database versions for every tool.

About

Methods, data sources, and how results are validated.